Hello,
Could you try using the DriveApp to download files?
http://www.pogoplug.com/home-en-support-downloads.html
If this doesn't work, then we'll probably have you turn on logging for the DriveApp to see exactly what is stopping downloads from working.
Another thing that could cause this is files being changed on the drive outside of Pogoplug's DriveApp or WebUI. In which case, removing .cedata from the drive would allow the pogoplug to re-index the file list. Please note this deletes any transcoded videos, thumbnails, metadata processing from the Pogoplug and it will start over on that process.
.cedata is a hidden folder that is at the root of your drive. You'd need to safely eject the drive from the Pogoplug using the WebUI, plug the drive into your PC/OSX, find a folded called ".cedata" at the top level of the drive and delete it.
The only limit to the Pogoplug is your imagination... and C skills... and linux skills. ^_^ h\t\tp://download.pogoplug.com/opensource/pogoplug-gcc.tar.bz2

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